Nosil, P, R.  Villoutreix,  C. F. de Carvalho, J. L. Feder, T. L. Parchman, Z. Gompert. Ecology shapes epistasis in a genotype-phenotype-fitness map for stick insect colour. Nature Ecology and Evolution (2020).  [link]

Villoutreix R., C. F. de Carvalho, V. Soria-Carrasco, D. Lindtke, M. De-la-Mora, M. Muschick, Jeffrey L. Feder, T. L. Parchman, Z. Gompert, P. Nosil. Large-Scale mutation in the evolution of a gene complex for cryptic coloration. Science (2020). [link]


Macgregor C., C. D. Thomas, D. B. Roy, M. A. Beaumont, J. R. Bell, T. Brereton, J. R. Bridle, C. Dytham, R. Fox, K. Gotthard, A. A. Hoffmann, G. Martin, I. Middlebrook, S. Nylin, P. J. Platts, R. Rasteiro, I. J. Saccheri, R. Villoutreix. C. W. Wheat & J. Hill. Climate-induced phenology shifts linked to range expansions in species with multiple reproductive cycles per year. Nature Communications (2019). [link]


Nosil P., R. Villoutreix, C. F. de Carvalho, T. E. Farkas, V. Soria-Carrasco, J. L. Feder, B. J. Crespi, Z. Gompert. Natural selection and the predictability of evolution in Timema stick insects. Science (2018) 359 (6377): 765-770. [pdf] [SI] [DataS1] [Dryad]


Frachon L.*,  C. Libourel*, R. Villoutreix, S. Carrère, C. Glorieux, C. Huard-Chauveau, M. Navascués, L. Gay, R. Vitalis, E. Baron, L. Amsellem, O. Bouchez, M. Vidal, V. Le Corre, D. Roby, J. Bergelson & F. Roux. Intermediate degrees of synergistic pleiotropy drive adaptive evolution in ecological time. Nature Ecology and Evolution (2017). *Authors contributed equally to this work. [pdf] [SI] [phenotypic data and scripts] [NCBI]

Lindtke D., K. Lucek, V. Soria-Carrasco, R. Villoutreix, T.E. Farkas, R. Riesch, S.R. Dennis, Z. Gompert & P. Nosil. Long-term balancing selection on chromosomal variants associated with crypsis in a stick insect. Molecular Ecology (2017). [pdf] [SI] [data]

Riesch R.*, M. Muschick*, D. Lindtke*, R. Villoutreix*, A.A. Comeault, T.E. Farkas, K. Lucek, E. Hellen, V. Soria-Carrasco, S.R. Dennis, C.F. de Carvalho, R.J. Safran, C.P. Sandoval, J.L. Feder, R. Gries, B.J. Crespi, G. Gries, Z. Gompert*, and P. Nosil. Transitions between phases of genomic differentiation during stick-insect speciation. Nature Ecology and Evolution (2017). *Authors contributed equally to this work. [pdf] [SI]
[PRJNA356725 whole genomes of natural populations]
[PRJNA356801 whole genomes of transplant experiments]
[PRJNA356911 GBS for updating reference genome linkage mapping]
[PRJNA356405 GBS for stages of speciation]
[PRJNA356885 GBS for tests on the effect of colour pattern and CHC on genome-wide differentiation]
[genome draft 0.3 is available on the Nosil Lab of Evolutionary Biology website]
[phenotypic data and scripts]


Roux F., T. Mary-Huard, E. Barillot, E. Wenes, L. Botran, S. Durand, R. Villoutreix, ML. Martin-Magniette, C. Camilleri, F. Budar. Cytonuclear interactions affect adaptive traits of the annual plant Arabidopsis thaliana in ecologically realistic conditions. PNAS (2016) 113 (13): 3687–3692. [pdf] [SI] [data]


Baron, E., J. Richirt, R. Villoutreix, L. Amsellem, F. Roux. The genetics of intra- and interspecific competitive response and effect in a local population of the annual plant Arabidopsis thaliana. Functional Ecology (2015) DOI: 10.1111/1365-2435.12436. [pdf] [SI] [Dryad]

Brachi B., C. Meyer, R. Villoutreix, A. Platt, F. Roux and J. Bergelson. Coselected genes determine adaptive variation in herbivore resistance throughout the native range of Arabidopsis thaliana. PNAS (2015) 112: 4032–4037. [pdf] [SI] [data]


Villoutreix R.*, B. Brachi*, N. Faure, N. Hautekèete, Y. Piquot, M. Pauwels, D. Roby, J. Cuguen, J. Bergelson and F. Roux. Investigation of the geographical scale of adaptive phenological variation and its underlying genetic bases in Arabidopsis thaliana. Molecular Ecology (2013), 22: 4222-4240. *Authors contributed equally to this work. [pdf] [SI] [Dryad]